NeuroAnsible is a software installation system to take an Ubuntu LTS desktop and turn it into a Neuroimaging workstation. NeuroAnsible installs software in a module system similar to those available on large HPCs, aiming to be minimally invasive to the underlying system.
Zapit is a general purpose package for coordinating galvo-based optostimulation in head-fixed mice. It is a software and hardware solution with an emphasis on flexibility and ease of use. The software will run on a variety of hardware designs and experimental paradigms.
Movement is a a Python toolbox for analysing body movements across space and time, to aid the study of animal behaviour in neuroscience. Pose estimation tools, such as DeepLabCut and SLEAP are now commonplace when processing video data of animal behaviour.
BCIWiki is a collection of links and resources related to computers that interface with the nervous system. The long-term goals for this project are to make it simple for anyone to understand the capabilities and limitations of Brain-Computer Interface (BCI) technologies, and to make informed hypotheses about their potential uses.
Bpod is an open-source platform for real-time behavioral measurement in multi-trial experiments. With control software in MATLAB and device firmware in Arduino, it is designed to be customized with the software talent in a typical academic Neuroscience lab.
NeuroMatic is a collection of WaveMetrics Igor Pro software tools for acquiring, analyzing and simulating electrophysiological data. By merging a wide range of tools into a single package, NeuroMatic facilitates a more integrated style of research.
NeuroShortcut is a brain-computer interface tool for triggering keyboard shortcuts, system commands, and macro scripts by changing mental states. The application uses the Brainflow library to stream live band power data to an interface where a user can then save a threshold value for triggering events on their computer.
This protocol collection explains how to build a low-cost, lightweight system to implant 1 Neuropixels 1.0 probe or 2 Neuropixels 2.0 probes into mice, record during freely moving behavior, then recover the probes for future use.
iElectrodes is an open-source Matlab toolbox to localize intracranial electrodes from MRI and CT images. Atlas and brain surfaces can be easily loaded for anatomical labeling. The toolbox is capable of working with ECoG (subdural grids and strips) and SEEG (depth) electrodes.
Reading directions vary across writing systems. Through long-term experience readers adjust their visual systems to the dominant reading direction in their writing systems. However, little is known about the neural correlates underlying these adjustments because different writing systems do not just differ in reading direction, but also regarding visual and linguistic properties.
