BrainGlobe

BrainGlobe is a suite of Python-based computational neuroanatomy software tools. We provide software packages for the analysis and visualisation of neuroanatomical data, particularly from whole-brain microscopy. In addition, we provide tools for working with brain atlases, to simplify development of new tools and aid collaboration and cooperation by adopting common standards.

Our tools include:

  • BrainGlobe Atlas API - A lightweight python module to interact with atlases for systems neuroscience

  • Cellfinder - Automated 3D cell detection and registration of whole-brain microscopy images

  • Brainrender - A Python based software for visualization of neuroanatomical and morphological data.

Project Author(s)

Project Author(s): Adam Tyson; Federico Claudi; Luigi Petrucco

https://github.com/brainglobe


This post was automatically generated by Adam Tyson


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